Package: RcmdrPlugin.EZR 1.68

RcmdrPlugin.EZR: R Commander Plug-in for the EZR (Easy R) Package

EZR (Easy R) adds a variety of statistical functions, including survival analyses, ROC analyses, metaanalyses, sample size calculation, and so on, to the R commander. EZR enables point-and-click easy access to statistical functions, especially for medical statistics. EZR is platform-independent and runs on Windows, Mac OS X, and UNIX. Its complete manual is available only in Japanese (Chugai Igakusha, ISBN: 978-4-498-10918-6, Nankodo, ISBN: 978-4-524-26158-1, Ohmsha, ISBN: 978-4-274-22632-8), but an report that introduced the investigation of EZR was published in Bone Marrow Transplantation (Nature Publishing Group) as an Open article. This report can be used as a simple manual. It can be freely downloaded from the journal website as shown below. This report has been cited in more than 10,000 scientific articles.

Authors:Yoshinobu Kanda

RcmdrPlugin.EZR_1.68.tar.gz
RcmdrPlugin.EZR_1.68.zip(r-4.5)RcmdrPlugin.EZR_1.68.zip(r-4.4)RcmdrPlugin.EZR_1.68.zip(r-4.3)
RcmdrPlugin.EZR_1.68.tgz(r-4.4-any)RcmdrPlugin.EZR_1.68.tgz(r-4.3-any)
RcmdrPlugin.EZR_1.68.tar.gz(r-4.5-noble)RcmdrPlugin.EZR_1.68.tar.gz(r-4.4-noble)
RcmdrPlugin.EZR_1.68.tgz(r-4.4-emscripten)RcmdrPlugin.EZR_1.68.tgz(r-4.3-emscripten)
RcmdrPlugin.EZR.pdf |RcmdrPlugin.EZR.html✨
RcmdrPlugin.EZR/json (API)
NEWS

# Install 'RcmdrPlugin.EZR' in R:
install.packages('RcmdrPlugin.EZR', repos = c('https://yoshikanda.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Datasets:
  • ShipWeight - Ship weight data for linear regression

On CRAN:

This package does not link to any Github/Gitlab/R-forge repository. No issue tracker or development information is available.

260 exports 1 stars 0.91 score 125 dependencies 1 scripts 2.6k downloads

Last updated 3 months agofrom:af8ce97393. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKAug 25 2024
R-4.5-winOKAug 25 2024
R-4.5-linuxOKAug 25 2024
R-4.4-winOKAug 25 2024
R-4.4-macOKAug 25 2024
R-4.3-winOKAug 25 2024
R-4.3-macOKAug 25 2024

Exports:BarplotFor3FactorsChrToFactorCochran.Q.testcox.subgroup.forestCP932toUTF8crr.subgroup.forestcrrAICcurrentFieldsCurrentSurvivaldataframe_printdot.plotepi.kappaepi.testserror.barEZREZRhelpEZRVersionfinaltable_dataframe_printget.median.ciglm.subgroup.foresthist2HistEZRifelse2IPTW.ATElistCoxModelslistLMModelslistLMMslogrank.trendMantel.ByarmodelFormulaCoxnchar_ZenToHanNewWindownrisknumSummary2objectCheckOrderedPlotpairwise.friedman.testpairwise.gray.testpairwise.kruskal.testpairwise.logrank.testpairwise.pairedt.testpairwise.prop2.testpar.cexpar.lwdpar.optionpdunnettPowerHazardPowerMeanPowerMeanPairedPowerProportionPowerProportionSingleArmprint.ci.summaryprop.confprop.diff.confprop.ratio.confpropensity.plotreadStataEZRRemoveOutlierrmean.tablermean.table.adjustedSampleHazardSampleHazardNonInfSampleMeanSampleMeanCISampleMeanNonInfSampleMeanPairedSamplePhaseIISampleProportionSampleProportionCISampleProportionNonInfSampleProportionSingleArmSampleSelectionDesignsaveLogsd2skewness.kurtosisst.diff.binomst.diff.binom.wst.diff.categorst.diff.categor.wst.diff.multinomst.diff.multinom.wst.diff.numericst.diff.numeric.wstackcumincStatMedAdjustedCumIncStatMedAdjustedSurvivalStatMedANCOVAStatMedANOVAStatMedBarGraphStatMedBarMeansStatMedBartlettStatMedBinVariableStatMedBoxPlotStatMedChangePaletteStatMedChrToFactorStatMedCLogisticStatMedcloseCommanderStatMedCloseCommanderStatMedcloseCommanderAndRStatMedCochranQStatMedComputeStatMedConsortStatMedCopyDatasetStatMedCorrelationStatMedCountMissingStatMedCoxRegressionStatMedCoxTDStatMedCrrStatMedCrrTDStatMedCumIncStatMedCurrentSurvivalStatMedDatediffStatMedDeleteVariableStatMedDropUnusedFactorLevelsStatMedDummyStatMedEnterTableStatMedExportDataSetStatMedExportStataStatMedFactorToNumericStatMedFilterNAStatMedFrequencyStatMedFriedmanStatMedFTestStatMedGraphOptionsStatMedGroupsBoxStatMedHistogramStatMedImportExcelStatMedImportMinitabStatMedImportSPSSStatMedImportSTATAStatMedJTStatMedKaplanMeierStatMedKappaStatMedKruWalliStatMedKSStatMedLinearMixedModelStatMedLinearRegressionStatMedLinePlotStatMedLoadCP932DataSetStatMedLoadDataSetStatMedLoadLogCP932StatMedLoadWorkspaceStatMedLogStatMedLogisticRegressionStatMedLogrankTrendStatMedMannWStatMedMatchingStatMedMcNemarStatMedMeanCIStatMedMergeDatasetsStatMedMetaStatMedMetaContStatMedMetaHazardStatMedMHStatMedModelFormulaStatMedMultiANOVAStatMedMultinomialLogitModelStatMedNAgroupStatMedNetworkMetaStatMedNewVarStatMedNewVar2StatMedNumericalSummariesStatMedNumericToFactorStatMedOrderedChartStatMedOrdinalRegressionModelStatMedPairedTtestStatMedPieChartStatMedplotMeansStatMedPlotMeansStatMedPowerHazardStatMedPowerMeansStatMedPowerMeansPairedStatMedPowerProportionsStatMedPowerProportionsSingleStatMedPredictiveValueStatMedProbCIStatMedProbDiffCIStatMedProbRatioCIStatMedProbSingleStatMedPropTrendStatMedQQPlotStatMedReadDataSetStatMedRecodeDialogStatMedReliabilityStatMedRenameDatasetStatMedRenameVariablesStatMedRenewDataSetStatMedReorderFactorStatMedRepANOVAStatMedROCStatMedROCtestStatMedSampleHazardStatMedSampleHazardNonInfStatMedSampleMeansStatMedSampleMeansCIStatMedSampleMeansNonInfStatMedSampleMeansPairedStatMedSamplePhaseIIStatMedSampleProportionsStatMedSampleProportionsCIStatMedSampleProportionsNonInfStatMedSampleProportionsSingleStatMedSampleSelectionDesignStatMedSankeyStatMedSaveDataSetStatMedScatterPlotStatMedScatterPlotMatrixStatMedSetContrastsStatMedSetPaletteStatMedSGStatMedSingleSampleTTestStatMedSortStatMedSpearmanStatMedStackStatMedStackCumIncStatMedStCoxStatMedStemAndLeafStatMedStripChartStatMedSubsetBoxStatMedSubsetDataSetStatMedSummaryResultsStatMedSurvivalROCStatMedSwimPlotStatMedTableOneStatMedTestStatMedTrainTestSplitStatMedTtestStatMedTwoWayTableStatMedVariableCheckStatMedViolinPlotStatMedWilSignSteelSteel.Dwassstep.AIC.crrstep.p.coxstep.p.coxcrrtdstep.p.coxtdstep.p.crrstep.p.glmstep.p.lmstsplitstsplit.newsummary.cisummary.kmsummary.table.MHsummary.table.twowayswimmer_arrowsSwimmerPlottrim.col.natwoway_dataframe_printvar2w.ciw.multiw.multiregw.survivalw.ttestw.twowaywaldtestwaldtest.crrwindow.type

Dependencies:abindbackportsbase64encbitbit64bootbroombslibcachemcarcarDatacellrangercheckmateclassclicliprclustercolorspacecowplotcpp11crayondata.tableDBIDerivdigestdoBydplyre1071effectsestimabilityevaluatefansifarverfastmapfontawesomeforcatsforeignFormulafsgenericsggplot2gluegridExtragtablehavenhighrHmischmshtmlTablehtmltoolshtmlwidgetsinsightisobandjquerylibjsonliteknitrlabelinglatticelifecyclelme4magrittrMASSMatrixMatrixModelsmemoisemgcvmicrobenchmarkmimeminqamitoolsmodelrmunsellnlmenloptrnnetnortestnumDerivpbkrtestpillarpkgconfigprettyunitsprogressproxypurrrquantregR6rappdirsRcmdrRcmdrMiscRColorBrewerRcppRcppArmadilloRcppEigenreadrreadstata13readxlrelimprematchrlangrmarkdownrpartrstudioapisandwichsassscalesSparseMstringistringrsurveysurvivaltcltk2tibbletidyrtidyselecttinytextzdbutf8vctrsviridisviridisLitevroomwithrxfunyamlzoo

Readme and manuals

Help Manual

Help pageTopics
Rcmdr Plug-In Package for the EZR (Easy R especially for medical statistics)BarplotFor3Factors ChrToFactor Cochran.Q.test cox.subgroup.forest CP932toUTF8 crr.subgroup.forest crrAIC currentFields CurrentSurvival dot.plot epi.kappa epi.tests error.bar EZR EZRhelp EZRVersion gassign get.median.ci glm.subgroup.forest listCoxModels listLMModels listLMMs logrank.trend modelFormulaCox nchar_ZenToHan NewWindow nrisk numSummary2 objectCheck OrderedPlot pairwise.friedman.test pairwise.gray.test pairwise.kruskal.test pairwise.logrank.test pairwise.pairedt.test pairwise.prop2.test par.cex par.lwd par.option pdunnett PowerHazard PowerMean PowerMeanPaired PowerProportion PowerProportionSingleArm print.ci.summary prop.conf prop.diff.conf prop.ratio.conf propensity.plot readStataEZR RemoveOutlier roc.best SampleHazard SampleHazardNonInf SampleMean SampleMeanCI SampleMeanNonInf SampleMeanPaired SamplePhaseII SampleProportion SampleProportionCI SampleProportionNonInf SampleProportionSingleArm SampleSelectionDesign saveLog sd2 skewness.kurtosis stackcuminc Steel Steel.Dwass step.AIC.crr step.p.cox step.p.coxcrrtd step.p.coxtd step.p.crr step.p.glm step.p.lm stsplit stsplit.new summary.ci summary.km summary.table.MH summary.table.twoway SwimmerPlot swimmer_arrows trim.col.na var2 waldtest waldtest.crr window.type
EZR dialogsEZRdialogs StatMedAdjustedCumInc StatMedAdjustedSurvival StatMedANCOVA StatMedANOVA StatMedBarGraph StatMedBarMeans StatMedBartlett StatMedBinVariable StatMedBoxPlot StatMedChangePalette StatMedChrToFactor StatMedCLogistic StatMedCloseCommander StatMedcloseCommander StatMedcloseCommanderAndR StatMedCochranQ StatMedCompute StatMedConsort StatMedCopyDataset StatMedCorrelation StatMedCountMissing StatMedCoxRegression StatMedCoxTD StatMedCrr StatMedCrrTD StatMedCumInc StatMedCurrentSurvival StatMedDatediff StatMedDeleteVariable StatMedDropUnusedFactorLevels StatMedDummy StatMedEnterTable StatMedExportDataSet StatMedExportStata StatMedFactorToNumeric StatMedFilterNA StatMedFrequency StatMedFriedman StatMedFTest StatMedGraphOptions StatMedGroupsBox StatMedHistogram StatMedImportExcel StatMedImportMinitab StatMedImportRODBCtable StatMedImportSPSS StatMedImportSTATA StatMedJT StatMedKaplanMeier StatMedKappa StatMedKruWalli StatMedKS StatMedLinearMixedModel StatMedLinearRegression StatMedLinePlot StatMedLoadCP932DataSet StatMedLoadDataSet StatMedLoadLogCP932 StatMedLoadWorkspace StatMedLog StatMedLogisticRegression StatMedLogrankTrend StatMedMannW StatMedMatching StatMedMcNemar StatMedMeanCI StatMedMergeDatasets StatMedMeta StatMedMetaCont StatMedMetaHazard StatMedMH StatMedModelFormula StatMedMultiANOVA StatMedMultinomialLogitModel StatMedNAgroup StatMedNetworkMeta StatMedNewVar StatMedNewVar2 StatMedNumericalSummaries StatMedNumericToFactor StatMedOrderedChart StatMedOrdinalRegressionModel StatMedPairedTtest StatMedPieChart StatMedPlotMeans StatMedplotMeans StatMedPowerHazard StatMedPowerMeans StatMedPowerMeansPaired StatMedPowerProportions StatMedPowerProportionsSingle StatMedPredictiveValue StatMedProbCI StatMedProbDiffCI StatMedProbRatioCI StatMedProbSingle StatMedPropTrend StatMedQQPlot StatMedReadDataSet StatMedRecodeDialog StatMedReliability StatMedRenameDataset StatMedRenameVariables StatMedRenewDataSet StatMedReorderFactor StatMedRepANOVA StatMedROC StatMedROCtest StatMedSampleHazard StatMedSampleHazardNonInf StatMedSampleMeans StatMedSampleMeansCI StatMedSampleMeansNonInf StatMedSampleMeansPaired StatMedSamplePhaseII StatMedSampleProportions StatMedSampleProportionsCI StatMedSampleProportionsNonInf StatMedSampleProportionsSingle StatMedSampleSelectionDesign StatMedSankey StatMedSaveDataSet StatMedScatterPlot StatMedScatterPlotMatrix StatMedSetContrasts StatMedSetPalette StatMedSG StatMedSingleSampleTTest StatMedSort StatMedSpearman StatMedStack StatMedStackCumInc StatMedStCox StatMedStemAndLeaf StatMedStripChart StatMedSubsetBox StatMedSubsetDataSet StatMedSummaryResults StatMedSurvivalROC StatMedSwimPlot StatMedTableOne StatMedTest StatMedTrainTestSplit StatMedTtest StatMedTwoWayTable StatMedVariableCheck StatMedViolinPlot StatMedWilSign
Modified version of hist()hist2
Plot a HistogramHistEZR
Conditional Element Selectionifelse2
Inverse probability of treatment weighting using stabilized weights based on propensity scoreIPTW.ATE
mantel-Byar testMantel.Byar
caluculation of restricted mean survivalrmean.table rmean.table.adjusted
Ship weight data for linear regressionShipWeight
Calculate standardized difference to assess balance of covariates in unweighted and weighted dataset.st.diff.binom st.diff.binom.w st.diff.categor st.diff.categor.w st.diff.multinom st.diff.multinom.w st.diff.numeric st.diff.numeric.w
Create a formatted table for presentationdataframe_print finaltable_dataframe_print nchar.ZenToHan twoway_dataframe_print w.ci w.multi w.multireg w.survival w.ttest w.twoway